You have terabytes of sequencing data and a deadline. We build and run the full analysis pipeline, from raw reads to actionable results, so your team can focus on the biology.
What We Do
- Genome assembly (de novo and reference-guided)
- Variant calling and annotation (SNPs, indels, structural variants, CNVs)
- Population genetics and phylogenomics
- Comparative genomics and synteny analysis
- Transcriptomics (RNA-seq, differential expression, pathway analysis)
- Marker development for breeding programs (cultivar authentication, genomic selection)
Organisms we’ve worked with: avocado, grapevine, maize, Drosophila, sturgeon, red abalone.
Deliverables
- Reproducible Snakemake/Nextflow workflow your team can rerun and extend
- Annotated variant tables, gene lists, and statistical summaries
- Publication-ready or report-ready figures and visualizations
- Written methods section suitable for manuscripts, grant reports, or internal documentation
- PCR-ready diagnostic markers for breeding and authentication applications
Have sequencing data that needs analysis? Let’s talk.
